- Predicted Gene MLOC_23576
MLOC_23576 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_23576_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_23576_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.7739 | 4.88527 | 6.26819 | 4.25177 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.0418 | 8.30947 | 9.49496 | 6.80367 |
INF1 | Young developing inflorescences (5mm) | 12.9905 | 13.1501 | 18.6519 | 10.4282 |
INF2 | Developing inflorescences (1-1.5 cm) | 17.2625 | 18.8183 | 22.6269 | 18.4469 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.85546 | 8.87783 | 11.9613 | 8.92842 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.4726 | 16.6072 | 22.9511 | 46.3615 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.4861 | 10.4539 | 13.3514 | 9.67988 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.13317 | 6.17513 | 6.62261 | 14.8475 |
CDS Structure of MLOC_23576
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_23576.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g72880.1 |
+3 |
7e-14 |
72 |
34/45 (76%) |
13101.m07948 protein DNA mismatch repair protein Mlh1, putative, expressed |
TAIR PP10 |
AT4G09140.1 |
+3 |
8e-15 |
74 |
37/45 (82%) |
| Symbols: ATMLH1, MLH1 | MUTL-homologue 1 | chr4:5817107-5821035 REVERSE LENGTH=737 |