- Predicted Gene MLOC_23322
MLOC_23322 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 30.4128 | 26.4326 | 24.9869 | 17.2037 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 26.8353 | 20.8218 | 24.3714 | 13.3967 |
| INF1 | Young developing inflorescences (5mm) | 11.6996 | 14.3019 | 15.5305 | 6.85854 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.5571 | 9.88725 | 8.837 | 8.70096 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 45.1783 | 24.7916 | 33.5279 | 22.2162 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.172 | 27.4819 | 36.2739 | 56.3431 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.6413 | 11.8417 | 12.0363 | 6.99952 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.50666 | 4.37956 | 3.92179 | 7.03822 |
CDS Structure of MLOC_23322
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_23322.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g24580.1 |
+2 |
2e-27 |
107 |
51/55 (93%) |
13103.m02900 protein transmembrane protein 85, putative, expressed |
| TAIR PP10 |
AT5G10780.2 |
+2 |
4e-20 |
86 |
39/56 (70%) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). | chr5:3408422-3409784 FORWARD LENGTH=187 |