MLOC_23312 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.50049.086039.6575211.245
LEAShoots from the seedlings (10 cm shoot stage)0.7798631.125810.5293910.666725
INF1Young developing inflorescences (5mm)0.0697568000.0629342
INF2Developing inflorescences (1-1.5 cm)0.114530.036586600.10446
ROORoots from the seedlings (10 cm shoot stage)11.93997.017954.919778.33754
NODDeveloping tillers at six leaf stage, 3rd internode0.1759220.09584020.02597020.204471
CAR5Developing grain, bracts removed (5 DPA)0.5164920.1785260.08848360.286498
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_23312






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_23312.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_23312.1CUST_3347_PI427708083AvailableAvailablecontig_162064 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g53860.1 -1 7e-91 291 159/261 (61%) 13102.m06162 protein OsSub22 - Putative Subtilisin homologue, expressed
TAIR PP10 AT3G14067.1 -1 2e-75 249 137/264 (52%) Subtilase family protein | chr3:4658421-4660754 REVERSE LENGTH=777