MLOC_233 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8712280.3731651.788650
LEAShoots from the seedlings (10 cm shoot stage)0.730221.4093100
INF1Young developing inflorescences (5mm)1.632531.183391.507940
INF2Developing inflorescences (1-1.5 cm)1.946942.319943.539830
ROORoots from the seedlings (10 cm shoot stage)1.373470.3784491.376930
NODDeveloping tillers at six leaf stage, 3rd internode1.087190.4391850.4183520
CAR5Developing grain, bracts removed (5 DPA)00.3520460.4436170
CAR15Developing grain, bracts removed (15 DPA)001.973790



CDS Structure of MLOC_233






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK360303
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360303CUST_24313_PI427708080NoneNoneNone
MLOC_1524.1NoneAvailableNonecontig_11350 (Mapped)
MLOC_233.1NoneAvailableNonecontig_1015798 (Not mapped)
MLOC_27517.1NoneAvailableNonecontig_1838674 (Mapped)
MLOC_27812.1NoneAvailableNonecontig_1864852 (Mapped)
MLOC_28444.1NoneAvailableNonecontig_1918442 (Not mapped)
MLOC_28663.2NoneAvailableNonecontig_1938399 (Not mapped)
MLOC_29384.2NoneAvailableAvailablecontig_200035 (Not mapped)
MLOC_33185.1NoneAvailableNonecontig_2351033 (Not mapped)
MLOC_33760.1NoneAvailableNonecontig_240086 (Mapped)
MLOC_3859.1NoneAvailableNonecontig_134006 (Not mapped)
MLOC_5227.1NoneAvailableNonecontig_1360356 (Not mapped)
MLOC_6140.1NoneAvailableNonecontig_1371096 (Not mapped)
MLOC_80678.1NoneAvailableNonecontig_921203 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----