MLOC_23246 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7157390.782380.2249110.805764
LEAShoots from the seedlings (10 cm shoot stage)5.649867.7496414.902210.633
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.008580.7887631.076111.42718
NODDeveloping tillers at six leaf stage, 3rd internode0.1572940.1165640.01894350.388026
CAR5Developing grain, bracts removed (5 DPA)0.8927280.4151680.5626340.704345
CAR15Developing grain, bracts removed (15 DPA)00.09817510.06700530.41118



CDS Structure of MLOC_23246






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_23246.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_23246.1CUST_3332_PI427708083AvailableAvailablecontig_161969 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g25440.1 -3 1e-58 196 116/139 (83%) 13104.m02389 protein cytokinin-O-glucosyltransferase 2, putative, expressed
TAIR PP10 AT1G22370.1 -3 4e-43 150 66/91 (73%) | Symbols: AtUGT85A5, UGT85A5 | UDP-glucosyl transferase 85A5 | chr1:7898116-7899045 REVERSE LENGTH=309