- Predicted Gene MLOC_23246
MLOC_23246 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.715739 | 0.78238 | 0.224911 | 0.805764 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.64986 | 7.74964 | 14.9022 | 10.633 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.00858 | 0.788763 | 1.07611 | 1.42718 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.157294 | 0.116564 | 0.0189435 | 0.388026 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.892728 | 0.415168 | 0.562634 | 0.704345 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0981751 | 0.0670053 | 0.41118 |
CDS Structure of MLOC_23246
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_23246.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g25440.1 |
-3 |
1e-58 |
196 |
116/139 (83%) |
13104.m02389 protein cytokinin-O-glucosyltransferase 2, putative, expressed |
TAIR PP10 |
AT1G22370.1 |
-3 |
4e-43 |
150 |
66/91 (73%) |
| Symbols: AtUGT85A5, UGT85A5 | UDP-glucosyl transferase 85A5 | chr1:7898116-7899045 REVERSE LENGTH=309 |