- Predicted Gene MLOC_23053
MLOC_23053 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 47.2965 | 52.3787 | 58.2841 | 67.8185 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.3715 | 7.8763 | 10.2504 | 13.1027 |
| INF1 | Young developing inflorescences (5mm) | 32.372 | 28.8558 | 27.1683 | 30.6995 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.8247 | 18.1322 | 18.1322 | 25.0138 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 35.8401 | 30.5911 | 29.7805 | 44.454 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 43.7066 | 31.1 | 33.2492 | 120.246 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 51.7449 | 48.4597 | 49.5613 | 63.2054 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.88404 | 2.75013 | 3.91417 | 10.606 |
CDS Structure of MLOC_23053
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_23053.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g26850.2 |
+1 |
4e-73 |
129 |
57/68 (84%) |
13111.m02570 protein erythronate-4-phosphate dehydrogenase, putative, expressed |
| TAIR PP10 |
AT4G13940.1 |
+1 |
7e-86 |
127 |
56/68 (82%) |
| Symbols: HOG1, EMB1395, SAHH1, MEE58, ATSAHH1 | S-adenosyl-L-homocysteine hydrolase | chr4:8054931-8056676 FORWARD LENGTH=485 |