- Predicted Gene MLOC_23015
MLOC_23015 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.3798 | 37.2987 | 43.6925 | 26.952 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.7044 | 27.9075 | 15.7937 | 11.4881 |
| INF1 | Young developing inflorescences (5mm) | 11.3693 | 11.108 | 9.8817 | 7.58908 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.14412 | 9.17986 | 8.02527 | 6.95384 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 46.5081 | 33.6249 | 74.2641 | 33.7146 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 20.1277 | 20.2474 | 33.3245 | 46.1377 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.2977 | 19.1846 | 15.3735 | 12.8874 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 19.7956 | 17.5446 | 17.8411 | 36.5412 |
CDS Structure of MLOC_23015
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_23015.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g53230.1 |
+2 |
1e-42 |
154 |
76/93 (82%) |
13103.m05811 protein bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed |
| TAIR PP10 |
AT4G14680.1 |
+2 |
1e-29 |
116 |
58/92 (63%) |
| Symbols: APS3 | Pseudouridine synthase/archaeosine transglycosylase-like family protein | chr4:8413443-8415311 REVERSE LENGTH=465 |