- Predicted Gene MLOC_22992
MLOC_22992 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.70611 | 3.46027 | 4.04425 | 3.38036 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.41897 | 1.81198 | 2.71456 | 1.95082 |
INF1 | Young developing inflorescences (5mm) | 5.31729 | 6.04756 | 4.33448 | 4.41194 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.021 | 18.3176 | 18.9827 | 19.2942 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.45451 | 4.46093 | 7.94594 | 4.93215 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.76586 | 0.486618 | 1.90407 | 1.8325 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.5224 | 14.2048 | 18.8098 | 16.4345 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.10716 | 4.5292 | 3.54643 | 9.58814 |
CDS Structure of MLOC_22992
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22992.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g20480.1 |
-3 |
3e-18 |
83 |
35/42 (83%) |
13108.m02133 protein OsFBO20 - F-box and other domain containing protein |
TAIR PP10 | None | - | - | - | - | - |