MLOC_22992 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.706113.460274.044253.38036
LEAShoots from the seedlings (10 cm shoot stage)3.418971.811982.714561.95082
INF1Young developing inflorescences (5mm)5.317296.047564.334484.41194
INF2Developing inflorescences (1-1.5 cm)16.02118.317618.982719.2942
ROORoots from the seedlings (10 cm shoot stage)3.454514.460937.945944.93215
NODDeveloping tillers at six leaf stage, 3rd internode2.765860.4866181.904071.8325
CAR5Developing grain, bracts removed (5 DPA)18.522414.204818.809816.4345
CAR15Developing grain, bracts removed (15 DPA)4.107164.52923.546439.58814



CDS Structure of MLOC_22992






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22992.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22992.1CUST_3293_PI427708083AvailableAvailablecontig_1615157 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g20480.1 -3 3e-18 83 35/42 (83%) 13108.m02133 protein OsFBO20 - F-box and other domain containing protein
TAIR PP10None-----