MLOC_22988 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.7160312.746413.275214.8129
LEAShoots from the seedlings (10 cm shoot stage)16.32132.392513.657236.03711
INF1Young developing inflorescences (5mm)1.350540.3547390.4172480.643417
INF2Developing inflorescences (1-1.5 cm)0.5969191.145541.092311.31654
ROORoots from the seedlings (10 cm shoot stage)4.37255.739233.627717.05532
NODDeveloping tillers at six leaf stage, 3rd internode5.358496.573724.3922116.6318
CAR5Developing grain, bracts removed (5 DPA)34.357337.067833.571742.9805
CAR15Developing grain, bracts removed (15 DPA)15.52313.058313.0239.2228



CDS Structure of MLOC_22988






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358911
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358911CUST_20035_PI427708080NoneNoneNone
MLOC_22988.1NoneAvailableAvailablecontig_161508 (Mapped)
MLOC_50755.1NoneAvailableNonecontig_365938 (Mapped)
MLOC_52951.1NoneAvailableNonecontig_37933 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----