MLOC_22907 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.08603480.1489840.2986680.210677
LEAShoots from the seedlings (10 cm shoot stage)0.8037790.2708440.415940.450128
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.04886340.11386300.432928
CAR5Developing grain, bracts removed (5 DPA)3.219245.255023.387894.8028
CAR15Developing grain, bracts removed (15 DPA)13.398316.452815.102743.3688



CDS Structure of MLOC_22907






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22907.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376169NoneNoneNoneNone
MLOC_22907.1CUST_2025_PI427708080AvailableAvailablecontig_161380 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g15710.1 +3 6e-38 131 64/118 (54%) 13102.m01752 protein plastocyanin-like domain containing protein, putative
TAIR PP10 AT2G02850.1 +3 6e-24 94 41/84 (49%) | Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129