- Predicted Gene MLOC_22808
MLOC_22808 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1392.97 | 934.19 | 1099.2 | 876.235 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 191.291 | 71.2499 | 166.183 | 98.978 |
| INF1 | Young developing inflorescences (5mm) | 128.731 | 168.84 | 155.451 | 112.672 |
| INF2 | Developing inflorescences (1-1.5 cm) | 184.146 | 183.676 | 178.491 | 173.33 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 690.405 | 408.136 | 423.985 | 362.798 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 745.284 | 821.332 | 387.854 | 1447.65 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 847.432 | 886.64 | 809.118 | 678.308 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 55.9614 | 64.4999 | 51.5293 | 123.44 |
CDS Structure of MLOC_22808
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22808.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g22960.1 |
+3 |
2e-154 |
441 |
225/248 (91%) |
13106.m02470 protein aquaporin protein, putative, expressed |
| TAIR PP10 |
AT3G16240.1 |
+3 |
2e-117 |
346 |
180/247 (73%) |
| Symbols: DELTA-TIP, TIP2;1, DELTA-TIP1, AQP1, ATTIP2;1 | delta tonoplast integral protein | chr3:5505534-5506788 FORWARD LENGTH=250 |
