MLOC_2280 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8888511.968051.932361.96818
LEAShoots from the seedlings (10 cm shoot stage)1.480170.8777160.1308740.898378
INF1Young developing inflorescences (5mm)0.217410.1547160.3597460.251214
INF2Developing inflorescences (1-1.5 cm)1.25293.103942.652182.80411
ROORoots from the seedlings (10 cm shoot stage)00.18199401.021
NODDeveloping tillers at six leaf stage, 3rd internode0.5803590.09149250.1603570.804503
CAR5Developing grain, bracts removed (5 DPA)7.104896.88768.340737.80858
CAR15Developing grain, bracts removed (15 DPA)0.676920.4889970.8792892.62965



CDS Structure of MLOC_2280






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2280.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2280.1CUST_11756_PI427708083AvailableAvailablecontig_120314 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g03610.1 +2 2e-33 129 61/73 (84%) 13105.m00352 protein phospholipase C, putative, expressed
TAIR PP10 AT3G55940.1 +2 5e-28 113 52/85 (61%) Phosphoinositide-specific phospholipase C family protein | chr3:20747787-20750184 FORWARD LENGTH=584