- Predicted Gene MLOC_22799
MLOC_22799 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_22799_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_22799_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 11.6918 | 19.6587 | 18.7731 | 16 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.3076 | 26.7951 | 22.0115 | 20.3663 |
INF1 | Young developing inflorescences (5mm) | 26.6464 | 31.5934 | 44.0146 | 26.3769 |
INF2 | Developing inflorescences (1-1.5 cm) | 56.1691 | 54.1863 | 63.3301 | 57.764 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.3771 | 19.3314 | 26.7509 | 20.3143 |
NOD | Developing tillers at six leaf stage, 3rd internode | 29.4068 | 24.7991 | 35.8723 | 78.6811 |
CAR5 | Developing grain, bracts removed (5 DPA) | 47.3408 | 44.3707 | 45.2143 | 40.866 |
CAR15 | Developing grain, bracts removed (15 DPA) | 29.4348 | 26.1257 | 28.8592 | 61.944 |
CDS Structure of MLOC_22799
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22799.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g37890.1 |
-2 |
9e-78 |
243 |
117/136 (86%) |
13111.m03714 protein NAD dependent epimerase/dehydratase family protein, putative, expressed |
TAIR PP10 |
AT5G28840.2 |
-2 |
6e-69 |
233 |
111/137 (81%) |
| Symbols: GME | GDP-D-mannose 3,5-epimerase | chr5:10862472-10864024 REVERSE LENGTH=377 |