MLOC_22738 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1224160.5150510.2587340.358952
LEAShoots from the seedlings (10 cm shoot stage)0.452260.56948100.377268
INF1Young developing inflorescences (5mm)0.2855510.1704870.08910640.162668
INF2Developing inflorescences (1-1.5 cm)0.147594000.185498
ROORoots from the seedlings (10 cm shoot stage)000.2481670.10075
NODDeveloping tillers at six leaf stage, 3rd internode1.025890.4959020.6133451.06333
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_22738






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22738.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22738.1CUST_3254_PI427708083AvailableAvailablecontig_161116 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g10460.1 +2 3e-64 210 127/156 (81%) 13104.m00941 protein amidase, putative, expressed
TAIR PP10 AT4G34880.1 +2 5e-33 124 87/143 (61%) Amidase family protein | chr4:16615549-16617424 FORWARD LENGTH=466