MLOC_22695 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.290012.082312.539872.19644
LEAShoots from the seedlings (10 cm shoot stage)10.22181.276824.080154.4078
INF1Young developing inflorescences (5mm)1.104720.6208981.847041.02507
INF2Developing inflorescences (1-1.5 cm)0.1107170.2043410.9330760.387657
ROORoots from the seedlings (10 cm shoot stage)2.385291.363454.916962.23153
NODDeveloping tillers at six leaf stage, 3rd internode2.85668.500890.20307119.3125
CAR5Developing grain, bracts removed (5 DPA)14.571712.20978.7210611.5392
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_22695






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22695.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22695.1CUST_3242_PI427708083AvailableAvailablecontig_1610438 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g02300.1 -1 6e-30 108 47/67 (70%) 13112.m00158 protein LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10 AT5G59320.1 -1 9e-20 81 34/64 (53%) | Symbols: LTP3 | lipid transfer protein 3 | chr5:23929051-23929492 FORWARD LENGTH=115