- Predicted Gene MLOC_22695
MLOC_22695 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.29001 | 2.08231 | 2.53987 | 2.19644 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.2218 | 1.27682 | 4.08015 | 4.4078 |
INF1 | Young developing inflorescences (5mm) | 1.10472 | 0.620898 | 1.84704 | 1.02507 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.110717 | 0.204341 | 0.933076 | 0.387657 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.38529 | 1.36345 | 4.91696 | 2.23153 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.8566 | 8.50089 | 0.203071 | 19.3125 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.5717 | 12.2097 | 8.72106 | 11.5392 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_22695
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22695.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g02300.1 |
-1 |
6e-30 |
108 |
47/67 (70%) |
13112.m00158 protein LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
TAIR PP10 |
AT5G59320.1 |
-1 |
9e-20 |
81 |
34/64 (53%) |
| Symbols: LTP3 | lipid transfer protein 3 | chr5:23929051-23929492 FORWARD LENGTH=115 |