MLOC_22627 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0341095000.0257989
LEAShoots from the seedlings (10 cm shoot stage)2.770034.4762122.14057.94174
INF1Young developing inflorescences (5mm)00.03286370.03770250.05133
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.7027350.03681650.4231950.18739
NODDeveloping tillers at six leaf stage, 3rd internode1.828860.236440.0255230.617084
CAR5Developing grain, bracts removed (5 DPA)0.0350226000.0314381
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_22627






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22627.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22627.1NoneAvailableAvailablecontig_1609384 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g09200.1 +1 7e-98 311 147/205 (72%) 13102.m01011 protein cytochrome P450 71D10, putative, expressed
TAIR PP10 AT3G26210.1 +1 4e-61 212 107/197 (54%) | Symbols: CYP71B23 | cytochrome P450, family 71, subfamily B, polypeptide 23 | chr3:9593329-9595202 REVERSE LENGTH=501