- Predicted Gene MLOC_22626
MLOC_22626 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_22626_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_22626_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 17.6927 | 24.101 | 23.6608 | 21.7708 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 33.4093 | 57.8896 | 74.7609 | 46.6806 |
INF1 | Young developing inflorescences (5mm) | 6.46262 | 5.57996 | 8.72334 | 5.74442 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.73064 | 6.82608 | 14.5562 | 10.2796 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.4437 | 15.607 | 28.3459 | 19.8538 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.676 | 16.0074 | 28.124 | 59.7033 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.36915 | 8.52383 | 10.1402 | 8.84874 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.3278 | 13.6092 | 15.1763 | 29.8314 |
CDS Structure of MLOC_22626
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22626.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g08260.4 |
+3 |
0.0 |
737 |
376/451 (83%) |
13112.m00872 protein dehydrogenase E1 component domain containing protein, expressed |
TAIR PP10 |
AT5G09300.2 |
+3 |
0.0 |
581 |
283/396 (71%) |
Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr5:2884282-2886291 REVERSE LENGTH=401 |