MLOC_2261 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains267.634248.153228.003256.442
LEAShoots from the seedlings (10 cm shoot stage)148.807142.166154.929122.964
INF1Young developing inflorescences (5mm)207.109115.01185.2236120.853
INF2Developing inflorescences (1-1.5 cm)18.732521.750825.968823.946
ROORoots from the seedlings (10 cm shoot stage)184.843106.52281.832132.349
NODDeveloping tillers at six leaf stage, 3rd internode173.28886.6518108.124246.431
CAR5Developing grain, bracts removed (5 DPA)93.025787.721789.022889.252
CAR15Developing grain, bracts removed (15 DPA)10.987614.273810.116128.3263



CDS Structure of MLOC_2261






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2261.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2261.1CUST_3234_PI427708083AvailableAvailablecontig_12014 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g37370.2 -1 1e-23 97 54/67 (81%) 13108.m09389 protein mitochondrial carrier protein, putative, expressed
TAIR PP10 AT2G22500.1 -1 1e-19 84 46/62 (74%) | Symbols: UCP5, ATPUMP5, DIC1 | uncoupling protein 5 | chr2:9563531-9564472 REVERSE LENGTH=313