MLOC_2260 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.301433.943655.867380
LEAShoots from the seedlings (10 cm shoot stage)5.95214.531316.673010
INF1Young developing inflorescences (5mm)8.741979.0543414.19340
INF2Developing inflorescences (1-1.5 cm)16.197812.52313.84340
ROORoots from the seedlings (10 cm shoot stage)2.16082.070950.7009960
NODDeveloping tillers at six leaf stage, 3rd internode2.07945.998277.308810
CAR5Developing grain, bracts removed (5 DPA)8.023165.26115.26670
CAR15Developing grain, bracts removed (15 DPA)5.105943.386235.593530



CDS Structure of MLOC_2260






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK368965
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368965CUST_13783_PI427708083NoneNoneNone
MLOC_2260.1NoneAvailableNonecontig_1201320 (Not mapped)
MLOC_27080.1NoneAvailableNonecontig_18044 (Not mapped)
MLOC_49632.1NoneAvailableNonecontig_345344 (Not mapped)
MLOC_63533.1NoneAvailableNonecontig_476737 (Not mapped)
MLOC_72395.1NoneAvailableNonecontig_615756 (Not mapped)
MLOC_76006.1NoneAvailableAvailablecontig_69809 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----