MLOC_2259 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.60733 | 6.00684 | 6.88314 | 6.24331 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 38.8733 | 7.72104 | 9.86091 | 16.9013 |
| INF1 | Young developing inflorescences (5mm) | 0.670131 | 0.624832 | 0.647506 | 0.574955 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.700767 | 0.524925 | 0.633159 | 0.700866 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.00079 | 1.38723 | 1.69043 | 1.8196 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.0366 | 4.46531 | 0.659414 | 13.8795 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.92247 | 1.6626 | 1.78634 | 1.8028 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.08757 | 1.05119 | 10.0297 | 6.98716 |
CDS Structure of MLOC_2259
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2259.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g15480.1 |
-3 |
2e-174 |
519 |
252/266 (95%) |
13109.m01466 protein Ser/Thr-rich protein T10 in DGCR region, putative, expressed |
| TAIR PP10 |
AT4G38260.1 |
-3 |
3e-75 |
252 |
127/272 (47%) |
Protein of unknown function (DUF833) | chr4:17937077-17938210 REVERSE LENGTH=275 |
