MLOC_22581 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.234886.438596.063855.64717
LEAShoots from the seedlings (10 cm shoot stage)3.407173.300972.905882.73468
INF1Young developing inflorescences (5mm)23.055326.472224.733820.9073
INF2Developing inflorescences (1-1.5 cm)25.766528.071522.214827.9064
ROORoots from the seedlings (10 cm shoot stage)3.270265.922895.966966.81065
NODDeveloping tillers at six leaf stage, 3rd internode1.173021.719973.700076.53234
CAR5Developing grain, bracts removed (5 DPA)8.937118.561049.737488.61187
CAR15Developing grain, bracts removed (15 DPA)2.062381.893982.357094.76896



CDS Structure of MLOC_22581






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372407
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372407CUST_22309_PI427708080NoneNoneNone
MLOC_22581.1NoneAvailableAvailablecontig_160882 (Mapped)
MLOC_41596.1NoneAvailableNonecontig_2596822 (Not mapped)
MLOC_48697.1NoneAvailableNonecontig_328075 (Not mapped)
MLOC_49010.1NoneAvailableNonecontig_333763 (Not mapped)
MLOC_76412.1NoneAvailableNonecontig_712818 (Not mapped)
MLOC_81069.1NoneAvailableNonecontig_9430 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----