MLOC_2256 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains112.741110.666127.36395.5439
LEAShoots from the seedlings (10 cm shoot stage)85.134295.904962.737458.7542
INF1Young developing inflorescences (5mm)148.136173.38187.156121.479
INF2Developing inflorescences (1-1.5 cm)299.087220.375275.196252.391
ROORoots from the seedlings (10 cm shoot stage)228.297205.469302.237208.316
NODDeveloping tillers at six leaf stage, 3rd internode148.92470.462464.366180.29
CAR5Developing grain, bracts removed (5 DPA)101.469112.121105.48388.78
CAR15Developing grain, bracts removed (15 DPA)42.548341.359346.133382.8084



CDS Structure of MLOC_2256






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2256.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2256.3CUST_11749_PI427708083AvailableAvailablecontig_120083 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g10310.1 +1 1e-32 119 48/65 (74%) 13105.m01108 protein acid phosphatase, putative, expressed
TAIR PP10 AT5G51260.1 +1 2e-16 75 31/65 (48%) HAD superfamily, subfamily IIIB acid phosphatase | chr5:20832222-20833466 REVERSE LENGTH=257