MLOC_2256 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 112.741 | 110.666 | 127.363 | 95.5439 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 85.1342 | 95.9049 | 62.7374 | 58.7542 |
INF1 | Young developing inflorescences (5mm) | 148.136 | 173.38 | 187.156 | 121.479 |
INF2 | Developing inflorescences (1-1.5 cm) | 299.087 | 220.375 | 275.196 | 252.391 |
ROO | Roots from the seedlings (10 cm shoot stage) | 228.297 | 205.469 | 302.237 | 208.316 |
NOD | Developing tillers at six leaf stage, 3rd internode | 148.924 | 70.4624 | 64.366 | 180.29 |
CAR5 | Developing grain, bracts removed (5 DPA) | 101.469 | 112.121 | 105.483 | 88.78 |
CAR15 | Developing grain, bracts removed (15 DPA) | 42.5483 | 41.3593 | 46.1333 | 82.8084 |
CDS Structure of MLOC_2256
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2256.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g10310.1 |
+1 |
1e-32 |
119 |
48/65 (74%) |
13105.m01108 protein acid phosphatase, putative, expressed |
TAIR PP10 |
AT5G51260.1 |
+1 |
2e-16 |
75 |
31/65 (48%) |
HAD superfamily, subfamily IIIB acid phosphatase | chr5:20832222-20833466 REVERSE LENGTH=257 |