- Predicted Gene MLOC_22512
MLOC_22512 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.55265 | 2.41212 | 2.01292 | 2.27657 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 34.2333 | 48.9378 | 64.2803 | 41.3606 |
| INF1 | Young developing inflorescences (5mm) | 4.56272 | 3.51495 | 4.91237 | 4.05051 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.79011 | 3.48406 | 4.55871 | 4.92451 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.46984 | 1.30165 | 1.43646 | 1.53535 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 36.1988 | 39.0222 | 82.8972 | 138.051 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.2083 | 13.1386 | 10.5075 | 13.4288 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.973492 | 1.64427 | 1.3232 | 3.77914 |
CDS Structure of MLOC_22512
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22512.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g33280.1 |
+1 |
2e-147 |
428 |
246/300 (82%) |
13105.m03439 protein thylakoid lumen protein, putative, expressed |
| TAIR PP10 |
AT1G54780.1 |
+1 |
3e-116 |
345 |
165/200 (83%) |
| Symbols: TLP18.3 | thylakoid lumen 18.3 kDa protein | chr1:20439533-20440953 FORWARD LENGTH=285 |