MLOC_22469 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.4220711.67599.967758.64935
LEAShoots from the seedlings (10 cm shoot stage)10.89787.3214911.79027.49913
INF1Young developing inflorescences (5mm)20.599724.311426.150316.8115
INF2Developing inflorescences (1-1.5 cm)30.613133.677835.592530.1642
ROORoots from the seedlings (10 cm shoot stage)9.0322511.107111.363410.4387
NODDeveloping tillers at six leaf stage, 3rd internode15.412420.14520.006156.7718
CAR5Developing grain, bracts removed (5 DPA)14.259516.896915.292912.2335
CAR15Developing grain, bracts removed (15 DPA)8.875997.097319.5098616.3647



CDS Structure of MLOC_22469






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22469.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22469.4CUST_3218_PI427708083AvailableAvailablecontig_160729 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05090.1 +3 2e-42 160 80/103 (78%) 13106.m00479 protein methyltransferase domain containing protein, expressed
TAIR PP10 AT1G04870.2 +3 2e-36 142 73/103 (71%) | Symbols: PRMT10, ATPRMT10 | protein arginine methyltransferase 10 | chr1:1373485-1375598 REVERSE LENGTH=383