MLOC_22463 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.88493.23963.498023.70908
LEAShoots from the seedlings (10 cm shoot stage)0.7425590.9767890.6745460.640664
INF1Young developing inflorescences (5mm)00.02296420.02416230.0456996
INF2Developing inflorescences (1-1.5 cm)0.080858500.02445560.0588359
ROORoots from the seedlings (10 cm shoot stage)5.263573.573956.151894.37822
NODDeveloping tillers at six leaf stage, 3rd internode0.364720.3707312.543812.32189
CAR5Developing grain, bracts removed (5 DPA)0.1798250.1722360.07340790.149643
CAR15Developing grain, bracts removed (15 DPA)0.5512880.4384620.486171.27483



CDS Structure of MLOC_22463






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22463.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22463.2CUST_10070_PI427708080AvailableAvailablecontig_1607174 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g49332.2 -3 5e-75 253 176/528 (33%) 13102.m05592 protein CSLE2 - cellulose synthase-like family E, expressed
TAIR PP10 AT4G23990.1 -3 5e-77 263 189/560 (34%) | Symbols: ATCSLG3, CSLG3 | cellulose synthase like G3 | chr4:12456491-12460498 FORWARD LENGTH=751