- Predicted Gene MLOC_22428
MLOC_22428 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_22428_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_22428_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 31.3167 | 27.5017 | 30.2207 | 24.9849 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 24.6919 | 25.9623 | 32.0701 | 20.7583 |
INF1 | Young developing inflorescences (5mm) | 9.57245 | 8.24071 | 7.37033 | 6.15369 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.58568 | 8.29105 | 9.11459 | 7.06749 |
ROO | Roots from the seedlings (10 cm shoot stage) | 29.9107 | 27.0263 | 23.8192 | 27.2576 |
NOD | Developing tillers at six leaf stage, 3rd internode | 66.898 | 49.3521 | 23.1189 | 129.547 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.25843 | 8.23213 | 8.3186 | 6.42298 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.32397 | 1.49824 | 1.25456 | 2.64625 |
CDS Structure of MLOC_22428
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22428.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g56930.1 |
-3 |
2e-150 |
439 |
239/284 (84%) |
13101.m06039 protein eukaryotic aspartyl protease domain containing protein, expressed |
TAIR PP10 |
AT5G22850.1 |
-3 |
2e-106 |
325 |
176/282 (62%) |
Eukaryotic aspartyl protease family protein | chr5:7633717-7636298 REVERSE LENGTH=493 |