MLOC_22363 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.700811.255510.917313.6301
LEAShoots from the seedlings (10 cm shoot stage)7.702975.539484.424665.53836
INF1Young developing inflorescences (5mm)0.367831.297990.6346740.863458
INF2Developing inflorescences (1-1.5 cm)0.2959120.18472600.347552
ROORoots from the seedlings (10 cm shoot stage)29.475825.6122.87637.8122
NODDeveloping tillers at six leaf stage, 3rd internode53.61933.518414.2303105.838
CAR5Developing grain, bracts removed (5 DPA)4.660676.81557.2787.94505
CAR15Developing grain, bracts removed (15 DPA)3.192523.497883.364119.45523



CDS Structure of MLOC_22363






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22363.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370033NoneNoneNoneNone
MLOC_22363.1CUST_2004_PI427708080AvailableAvailablecontig_1605906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58570.1 -2 3e-64 204 100/125 (80%) 13104.m06153 protein C2 domain containing protein, putative, expressed
TAIR PP10 AT1G63220.1 -2 6e-52 171 86/143 (60%) Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:23449017-23450244 FORWARD LENGTH=147