- Predicted Gene MLOC_22352
MLOC_22352 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_22352_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_22352_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.680153 | 1.38545 | 1.34734 | 1.27927 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.1211 | 1.4574 | 1.08997 | 1.44665 |
INF1 | Young developing inflorescences (5mm) | 4.81928 | 5.33994 | 6.58663 | 4.85858 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.5329 | 6.29186 | 7.91642 | 7.86303 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.955501 | 1.05483 | 0.651135 | 1.39599 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.30603 | 2.0718 | 3.05965 | 7.82363 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.08428 | 3.17638 | 3.4874 | 3.38595 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.856872 | 1.11413 | 1.71018 | 2.67547 |
CDS Structure of MLOC_22352
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22352.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g04850.3 |
+1 |
1e-44 |
157 |
115/133 (86%) |
13107.m09971 protein pre-mRNA-processing factor 31, putative, expressed |
TAIR PP10 |
AT1G60170.1 |
+1 |
1e-31 |
119 |
100/145 (69%) |
| Symbols: emb1220 | pre-mRNA processing ribonucleoprotein binding region-containing protein | chr1:22193008-22195177 FORWARD LENGTH=485 |