MLOC_22342 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.910535.595595.657294.59258
LEAShoots from the seedlings (10 cm shoot stage)9.908468.5193210.19647.93216
INF1Young developing inflorescences (5mm)14.754315.932416.553711.8772
INF2Developing inflorescences (1-1.5 cm)21.387720.795520.577521.223
ROORoots from the seedlings (10 cm shoot stage)3.024055.762963.690035.92892
NODDeveloping tillers at six leaf stage, 3rd internode4.729877.4176911.323825.0885
CAR5Developing grain, bracts removed (5 DPA)10.210511.108510.78359.6001
CAR15Developing grain, bracts removed (15 DPA)4.777794.804065.252349.88149



CDS Structure of MLOC_22342






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22342.15
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22342.15CUST_10062_PI427708080AvailableAvailablecontig_160567 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g56630.2 +2 0.0 727 480/780 (62%) 13104.m05902 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT1G70620.1 +2 6e-35 144 189/760 (25%) cyclin-related | chr1:26626634-26630755 FORWARD LENGTH=897