- Predicted Gene MLOC_22342
MLOC_22342 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_22342_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_22342_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.91053 | 5.59559 | 5.65729 | 4.59258 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.90846 | 8.51932 | 10.1964 | 7.93216 |
INF1 | Young developing inflorescences (5mm) | 14.7543 | 15.9324 | 16.5537 | 11.8772 |
INF2 | Developing inflorescences (1-1.5 cm) | 21.3877 | 20.7955 | 20.5775 | 21.223 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.02405 | 5.76296 | 3.69003 | 5.92892 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.72987 | 7.41769 | 11.3238 | 25.0885 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.2105 | 11.1085 | 10.7835 | 9.6001 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.77779 | 4.80406 | 5.25234 | 9.88149 |
CDS Structure of MLOC_22342
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22342.15
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g56630.2 |
+2 |
0.0 |
727 |
480/780 (62%) |
13104.m05902 protein transposon protein, putative, unclassified, expressed |
TAIR PP10 |
AT1G70620.1 |
+2 |
6e-35 |
144 |
189/760 (25%) |
cyclin-related | chr1:26626634-26630755 FORWARD LENGTH=897 |