- Predicted Gene MLOC_22339
MLOC_22339 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 50.7833 | 62.8496 | 57.5854 | 70.9149 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 86.1258 | 125.119 | 68.5649 | 86.0807 |
| INF1 | Young developing inflorescences (5mm) | 14.6126 | 20.1514 | 19.3778 | 18.0836 |
| INF2 | Developing inflorescences (1-1.5 cm) | 37.151 | 33.6433 | 30.9996 | 44.0111 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 72.1933 | 51.2192 | 78.3092 | 81.5408 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 77.9109 | 70.8 | 86.1851 | 240.878 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 52.2034 | 54.5516 | 42.4223 | 58.0096 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.76234 | 7.35637 | 7.01174 | 21.9193 |
CDS Structure of MLOC_22339
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22339.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g02300.1 |
-2 |
5e-17 |
77 |
37/40 (93%) |
13105.m00194 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G02560.1 |
-2 |
4e-17 |
76 |
36/40 (90%) |
| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=153 |