MLOC_22256 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.496727.88276.854866.92245
LEAShoots from the seedlings (10 cm shoot stage)7.473288.634418.572877.14492
INF1Young developing inflorescences (5mm)16.859315.636615.411312.7612
INF2Developing inflorescences (1-1.5 cm)16.11213.932215.590216.004
ROORoots from the seedlings (10 cm shoot stage)1.924435.393514.861976.0584
NODDeveloping tillers at six leaf stage, 3rd internode1.539612.2154.378648.32683
CAR5Developing grain, bracts removed (5 DPA)10.435910.714611.604710.2993
CAR15Developing grain, bracts removed (15 DPA)5.88175.990475.2728912.6133



CDS Structure of MLOC_22256






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22256.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22256.3CUST_10056_PI427708080AvailableAvailablecontig_160451 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g52200.1 +1 0.0 1346 718/890 (81%) 13104.m05346 protein RNA recognition motif containing protein, putative, expressed
TAIR PP10 AT4G19610.1 +1 0.0 701 403/887 (45%) nucleotide binding;nucleic acid binding;RNA binding | chr4:10677482-10681623 FORWARD LENGTH=816