MLOC_22206 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.658527.046215.097337.08711
LEAShoots from the seedlings (10 cm shoot stage)2.921691.423361.341151.76103
INF1Young developing inflorescences (5mm)10.20328.4683712.04069.81596
INF2Developing inflorescences (1-1.5 cm)4.809954.684456.510986.48573
ROORoots from the seedlings (10 cm shoot stage)7.376313.478884.510195.87761
NODDeveloping tillers at six leaf stage, 3rd internode1.661430.7035842.048153.60424
CAR5Developing grain, bracts removed (5 DPA)6.34349.589177.713439.34918
CAR15Developing grain, bracts removed (15 DPA)1.491820.2371481.282092.56224



CDS Structure of MLOC_22206






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22206.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22206.1NoneAvailableAvailablecontig_1603850 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g26850.3 -2 6e-14 67 32/36 (89%) 13111.m02571 protein erythronate-4-phosphate dehydrogenase, putative, expressed
TAIR PP10 AT4G13940.4 -2 4e-35 124 63/71 (89%) | Symbols: HOG1, SAHH1 | S-adenosyl-L-homocysteine hydrolase | chr4:8054931-8056763 FORWARD LENGTH=325