MLOC_2219 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_2219_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_2219_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.35899 | 1.08262 | 1.29651 | 1.17632 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.81921 | 0.462835 | 0.820475 | 0.867291 |
INF1 | Young developing inflorescences (5mm) | 1.92179 | 1.92197 | 2.8676 | 1.73474 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.70802 | 2.84163 | 4.10868 | 3.09977 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.02723 | 0.937113 | 1.10284 | 1.08108 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.459704 | 2.10205 | 0.749077 | 4.9633 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.7781 | 11.4236 | 8.72405 | 9.11263 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.85857 | 0.901754 | 3.00164 | 3.85628 |
CDS Structure of MLOC_2219
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2219.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g19310.1 |
+3 |
1e-15 |
78 |
43/73 (59%) |
13109.m01812 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |