MLOC_2219 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.358991.082621.296511.17632
LEAShoots from the seedlings (10 cm shoot stage)1.819210.4628350.8204750.867291
INF1Young developing inflorescences (5mm)1.921791.921972.86761.73474
INF2Developing inflorescences (1-1.5 cm)2.708022.841634.108683.09977
ROORoots from the seedlings (10 cm shoot stage)1.027230.9371131.102841.08108
NODDeveloping tillers at six leaf stage, 3rd internode0.4597042.102050.7490774.9633
CAR5Developing grain, bracts removed (5 DPA)9.778111.42368.724059.11263
CAR15Developing grain, bracts removed (15 DPA)1.858570.9017543.001643.85628



CDS Structure of MLOC_2219






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2219.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2219.1CUST_3168_PI427708083AvailableAvailablecontig_119743 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g19310.1 +3 1e-15 78 43/73 (59%) 13109.m01812 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----