MLOC_22184 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.8836311.13612.3249.45193
LEAShoots from the seedlings (10 cm shoot stage)24.060510.343311.807913.1454
INF1Young developing inflorescences (5mm)1.124251.815031.18021.07314
INF2Developing inflorescences (1-1.5 cm)2.220961.448382.101631.93585
ROORoots from the seedlings (10 cm shoot stage)4.9977.203156.785747.69337
NODDeveloping tillers at six leaf stage, 3rd internode56.91661.803101.349204.657
CAR5Developing grain, bracts removed (5 DPA)5.550586.04155.683355.14676
CAR15Developing grain, bracts removed (15 DPA)0.3708380.313790.375430.729194



CDS Structure of MLOC_22184






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22184.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354941NoneNoneNoneNone
MLOC_22184.1CUST_1998_PI427708080AvailableAvailablecontig_160351 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g27700.2 -3 0.0 904 478/575 (83%) 13109.m02714 protein microtubule associated protein, putative, expressed
TAIR PP10 AT2G01910.1 -3 0.0 607 328/579 (57%) | Symbols: ATMAP65-6, MAP65-6 | Microtubule associated protein (MAP65/ASE1) family protein | chr2:417191-420182 FORWARD LENGTH=608