- Predicted Gene MLOC_22183
MLOC_22183 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_22183_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_22183_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.55264 | 1.50996 | 1.7527 | 1.17961 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.1333 | 3.44891 | 3.60217 | 1.96323 |
INF1 | Young developing inflorescences (5mm) | 2.47419 | 2.31188 | 2.76048 | 1.81291 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.18981 | 2.89962 | 3.07932 | 2.87074 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.44396 | 1.16777 | 1.58107 | 1.18665 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.882655 | 0.966337 | 1.41314 | 3.11694 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.0508 | 2.72993 | 2.83771 | 1.96488 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.65424 | 1.19759 | 1.15533 | 2.99141 |
CDS Structure of MLOC_22183
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22183.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g27690.5 |
+2 |
6e-46 |
165 |
87/129 (67%) |
13109.m02707 protein expressed protein |
TAIR PP10 |
AT4G38490.1 |
+2 |
5e-24 |
100 |
47/78 (60%) |
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:18006385-18007203 FORWARD LENGTH=153 |