MLOC_22174 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.47547.753057.543477.927
LEAShoots from the seedlings (10 cm shoot stage)2.17231.019860.7045031.00876
INF1Young developing inflorescences (5mm)0.1767930.293370.1416130.195103
INF2Developing inflorescences (1-1.5 cm)0.211780.1379240.0620630.17129
ROORoots from the seedlings (10 cm shoot stage)36.093135.692619.156934.9355
NODDeveloping tillers at six leaf stage, 3rd internode692.055542.765339.8291101.29
CAR5Developing grain, bracts removed (5 DPA)0.06705960.237750.0616690.138121
CAR15Developing grain, bracts removed (15 DPA)0.06985960.03371090.0599050.145527



CDS Structure of MLOC_22174






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22174.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22174.2CUST_10046_PI427708080AvailableAvailablecontig_160336 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g38390.1 -1 0.0 867 427/499 (86%) 13105.m04024 protein laccase precursor protein, putative
TAIR PP10 AT5G60020.1 -1 0.0 665 318/515 (62%) | Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577