- Predicted Gene MLOC_22145
MLOC_22145 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.78602 | 9.44847 | 8.18303 | 10.8699 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.9562 | 4.30424 | 4.35002 | 4.95795 |
| INF1 | Young developing inflorescences (5mm) | 3.47667 | 4.09989 | 4.31308 | 3.93279 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.10679 | 3.05549 | 5.55417 | 5.10403 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.9695 | 13.9266 | 12.7662 | 20.324 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.05563 | 3.58524 | 2.6973 | 11.0617 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.9753 | 5.75505 | 4.85332 | 5.95411 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 15.0293 | 14.3012 | 15.3053 | 40.9143 |
CDS Structure of MLOC_22145
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22145.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g41460.1 |
-2 |
0.0 |
654 |
347/362 (96%) |
13103.m04461 protein CAMK_CAMK_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| TAIR PP10 |
AT4G33950.1 |
-2 |
0.0 |
575 |
292/364 (80%) |
| Symbols: OST1, SNRK2-6, SRK2E, SNRK2.6, P44, ATOST1 | Protein kinase superfamily protein | chr4:16272364-16274657 FORWARD LENGTH=362 |
