- Predicted Gene MLOC_22127
MLOC_22127 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_22127_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_22127_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 16.7449 | 14.5097 | 14.2433 | 14.3636 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.185 | 11.3691 | 12.1743 | 10.9134 |
INF1 | Young developing inflorescences (5mm) | 11.4618 | 11.6666 | 13.6112 | 9.26278 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.0213 | 13.5016 | 13.566 | 12.9948 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.48001 | 12.9257 | 11.8243 | 14.463 |
NOD | Developing tillers at six leaf stage, 3rd internode | 16.9606 | 19.2576 | 12.3359 | 59.0946 |
CAR5 | Developing grain, bracts removed (5 DPA) | 17.5993 | 16.2654 | 17.2398 | 15.4283 |
CAR15 | Developing grain, bracts removed (15 DPA) | 13.1793 | 11.1932 | 10.5969 | 24.9332 |
CDS Structure of MLOC_22127
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_22127.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g37690.1 |
+3 |
5e-50 |
177 |
95/130 (73%) |
13111.m03690 protein TBC domain containing protein, expressed |
TAIR PP10 |
AT5G54780.1 |
+3 |
5e-40 |
148 |
76/127 (60%) |
Ypt/Rab-GAP domain of gyp1p superfamily protein | chr5:22248696-22251692 REVERSE LENGTH=432 |