MLOC_22120 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.631215.990824.895256.46213
LEAShoots from the seedlings (10 cm shoot stage)4.33415.424176.497014.34489
INF1Young developing inflorescences (5mm)6.062189.5100216.07938.77713
INF2Developing inflorescences (1-1.5 cm)10.12568.5061912.269410.5723
ROORoots from the seedlings (10 cm shoot stage)4.946799.967437.968659.69627
NODDeveloping tillers at six leaf stage, 3rd internode5.0847316.777811.108745.5174
CAR5Developing grain, bracts removed (5 DPA)10.663110.972910.21939.84338
CAR15Developing grain, bracts removed (15 DPA)0.3859750.4309761.032041.27727



CDS Structure of MLOC_22120






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22120.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22120.1CUST_3160_PI427708083AvailableAvailablecontig_160266 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01440.1 -3 2e-59 204 103/151 (68%) 13106.m00046 protein integral membrane protein, putative, expressed
TAIR PP10 AT4G27870.1 -3 3e-34 132 72/167 (43%) Vacuolar iron transporter (VIT) family protein | chr4:13878983-13882679 FORWARD LENGTH=761