MLOC_22069 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.070496.219666.251466.11225
LEAShoots from the seedlings (10 cm shoot stage)9.167228.3822411.0298.15834
INF1Young developing inflorescences (5mm)6.080698.464077.872156.37023
INF2Developing inflorescences (1-1.5 cm)5.918325.58675.649286.31495
ROORoots from the seedlings (10 cm shoot stage)7.675278.018748.564669.64846
NODDeveloping tillers at six leaf stage, 3rd internode11.140713.532615.119348.3061
CAR5Developing grain, bracts removed (5 DPA)5.904365.034974.943095.25834
CAR15Developing grain, bracts removed (15 DPA)1.09840.9667261.384442.59923



CDS Structure of MLOC_22069






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22069.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22069.1CUST_10037_PI427708080AvailableAvailablecontig_160208 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01410.1 +2 1e-162 467 217/252 (86%) 13106.m00043 protein glutamine cyclotransferase precursor, putative, expressed
TAIR PP10 AT4G25720.1 +2 2e-109 329 156/241 (65%) | Symbols: ATQC, QC, QCT | glutaminyl cyclase | chr4:13099929-13102470 REVERSE LENGTH=320