MLOC_22062 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)00.5600663.420421.35663
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.10647700.131371
ROORoots from the seedlings (10 cm shoot stage)0.5733583.4873103.64692
NODDeveloping tillers at six leaf stage, 3rd internode0.1412220.082326900.321025
CAR5Developing grain, bracts removed (5 DPA)000.1623810.0954677
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_22062






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22062.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_22062.1CUST_3151_PI427708083AvailableAvailablecontig_160201 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g27930.1 -2 7e-21 87 38/41 (93%) 13109.m02743 protein ubiquitin fusion protein, putative, expressed
TAIR PP10 AT3G52590.1 -2 9e-14 66 26/37 (70%) | Symbols: UBQ1, EMB2167, ERD16, HAP4 | ubiquitin extension protein 1 | chr3:19505668-19506681 FORWARD LENGTH=128