MLOC_22013 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.814427.353730.124343.8516
LEAShoots from the seedlings (10 cm shoot stage)30.402932.134630.408634.7188
INF1Young developing inflorescences (5mm)34.059330.829625.678533.2838
INF2Developing inflorescences (1-1.5 cm)19.502218.494327.330930.0403
ROORoots from the seedlings (10 cm shoot stage)104.33450.768166.3505108.696
NODDeveloping tillers at six leaf stage, 3rd internode48.123727.488233.1076112.188
CAR5Developing grain, bracts removed (5 DPA)49.007642.306927.350551.7195
CAR15Developing grain, bracts removed (15 DPA)37.244234.394830.0167105.397



CDS Structure of MLOC_22013






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_22013.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359689NoneNoneNoneNone
MLOC_22013.1CUST_1988_PI427708080AvailableAvailablecontig_160134 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g41770.1 -3 1e-71 230 164/248 (66%) 13106.m04362 protein bZIP transcription factor domain containing protein, expressed
TAIR PP10 AT1G42990.1 -3 2e-21 92 66/161 (41%) | Symbols: ATBZIP60, BZIP60 | basic region/leucine zipper motif 60 | chr1:16136062-16137459 REVERSE LENGTH=295