- Predicted Gene MLOC_21960
MLOC_21960 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_21960_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_21960_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 14.3929 | 7.94367 | 11.8287 | 9.77876 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.8937 | 6.67042 | 8.95766 | 5.83831 |
INF1 | Young developing inflorescences (5mm) | 9.69921 | 14.231 | 14.1686 | 9.48561 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.1673 | 15.082 | 11.9555 | 12.7022 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.8671 | 10.8445 | 13.2151 | 12.9983 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.5819 | 10.4125 | 12.1587 | 31.0766 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.0967 | 14.1128 | 12.3832 | 10.6341 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.7627 | 7.62543 | 7.08221 | 17.5991 |
CDS Structure of MLOC_21960
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21960.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g29420.4 |
-3 |
1e-33 |
127 |
61/70 (87%) |
13107.m10004 protein DNA-directed RNA polymerase III subunit RPC8, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |