MLOC_21922 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.5320226.931420.22790
LEAShoots from the seedlings (10 cm shoot stage)42.008426.216620.990
INF1Young developing inflorescences (5mm)27.789918.018219.93570
INF2Developing inflorescences (1-1.5 cm)18.052816.58714.11660
ROORoots from the seedlings (10 cm shoot stage)0.4336864.266232.919080
NODDeveloping tillers at six leaf stage, 3rd internode5.898986.168245.585640
CAR5Developing grain, bracts removed (5 DPA)17.332414.652516.12230
CAR15Developing grain, bracts removed (15 DPA)1.384341.494151.915330



CDS Structure of MLOC_21922






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362539
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362539CUST_24540_PI427708080NoneNoneNone
MLOC_21922.1NoneAvailableNonecontig_160017 (Mapped)
MLOC_21941.2NoneAvailableAvailablecontig_160040 (Mapped)
MLOC_40713.1NoneAvailableNonecontig_2563322 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----