MLOC_21893 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.09099680.3228320.1437280.176228
LEAShoots from the seedlings (10 cm shoot stage)1.222210.9033790.6468940.703758
INF1Young developing inflorescences (5mm)1.164310.960770.9708240.718682
INF2Developing inflorescences (1-1.5 cm)2.435282.62671.707262.12201
ROORoots from the seedlings (10 cm shoot stage)0.03538970.3470980.1296220.267
NODDeveloping tillers at six leaf stage, 3rd internode0.08248320.5276770.3191241.28909
CAR5Developing grain, bracts removed (5 DPA)0.6502760.3537490.8562060.460054
CAR15Developing grain, bracts removed (15 DPA)0.3222030.3526760.4368260.642153



CDS Structure of MLOC_21893






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21893.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21893.1CUST_11719_PI427708083AvailableAvailablecontig_159989 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g40360.2 -2 9e-24 108 73/90 (81%) 13106.m04194 protein OsFBL30 - F-box domain and LRR containing protein, expressed
TAIR PP10None-----