MLOC_21880 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.626842.925423.214620
LEAShoots from the seedlings (10 cm shoot stage)7.194244.46924.305470
INF1Young developing inflorescences (5mm)10.928911.20412.2960
INF2Developing inflorescences (1-1.5 cm)10.530911.52087.757290
ROORoots from the seedlings (10 cm shoot stage)1.126371.844031.639190
NODDeveloping tillers at six leaf stage, 3rd internode2.012661.793112.855380
CAR5Developing grain, bracts removed (5 DPA)5.808235.756538.552790
CAR15Developing grain, bracts removed (15 DPA)1.658262.425281.727210



CDS Structure of MLOC_21880






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375886
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375886CUST_22912_PI427708080NoneNoneNone
MLOC_18033.1NoneAvailableNonecontig_1579003 (Mapped)
MLOC_21880.1NoneAvailableNonecontig_1599807 (Mapped)
MLOC_78180.2NoneAvailableAvailablecontig_79031 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----