MLOC_21867 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.565162.331222.373252.44501
LEAShoots from the seedlings (10 cm shoot stage)3.540843.946443.267963.07691
INF1Young developing inflorescences (5mm)3.264194.999574.404163.36377
INF2Developing inflorescences (1-1.5 cm)3.13445.153183.247894.36568
ROORoots from the seedlings (10 cm shoot stage)1.602541.108231.536391.50987
NODDeveloping tillers at six leaf stage, 3rd internode3.234023.51084.1562812.3898
CAR5Developing grain, bracts removed (5 DPA)0.3747740.2708170.2452420.279769
CAR15Developing grain, bracts removed (15 DPA)0.1516020.07826950.5614960.470106



CDS Structure of MLOC_21867






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_21867.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_21867.4CUST_10023_PI427708080AvailableAvailablecontig_159963 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g42540.1 +3 4e-145 415 200/240 (83%) 13111.m04230 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed
TAIR PP10 AT1G04420.1 +3 3e-54 183 105/244 (43%) NAD(P)-linked oxidoreductase superfamily protein | chr1:1191634-1193699 FORWARD LENGTH=412