- Predicted Gene MLOC_21828
MLOC_21828 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 18.4921 | 20.0532 | 18.0674 | 18.0949 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 22.352 | 4.22328 | 8.86587 | 10.7109 |
| INF1 | Young developing inflorescences (5mm) | 34.1408 | 41.5546 | 40.4805 | 28.6149 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.401 | 22.3637 | 20.168 | 21.0712 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.63593 | 7.89004 | 9.53865 | 8.36225 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 45.5376 | 39.5811 | 31.6774 | 132.964 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.22465 | 7.34566 | 8.58031 | 6.78712 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.812308 | 1.29956 | 0.96373 | 2.01959 |
CDS Structure of MLOC_21828
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21828.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g33080.1 |
+1 |
8e-87 |
277 |
135/146 (92%) |
13101.m03340 protein fimbrin-like protein 2, putative, expressed |
| TAIR PP10 |
AT5G48460.1 |
+1 |
3e-65 |
218 |
104/137 (76%) |
Actin binding Calponin homology (CH) domain-containing protein | chr5:19636225-19639365 REVERSE LENGTH=654 |