MLOC_218 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.282726.6060812.58518.27064
LEAShoots from the seedlings (10 cm shoot stage)105.59312.7239.251642.7725
INF1Young developing inflorescences (5mm)0.05680710.033048400.0417115
INF2Developing inflorescences (1-1.5 cm)0.11704200.1063740.121589
ROORoots from the seedlings (10 cm shoot stage)7.728025.08095.224345.78857
NODDeveloping tillers at six leaf stage, 3rd internode9.5536610.38420.32233923.1786
CAR5Developing grain, bracts removed (5 DPA)47.275157.177756.36450.9358
CAR15Developing grain, bracts removed (15 DPA)0.383650.09029030.1489130.543439



CDS Structure of MLOC_218






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_218.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376582NoneNoneNoneNone
MLOC_218.1CUST_20_PI427708080AvailableAvailablecontig_101421 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g37850.1 +2 3e-36 132 60/90 (67%) 13107.m03904 protein expressed protein
TAIR PP10None-----