- Predicted Gene MLOC_21799
MLOC_21799 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 9.31986 | 8.91534 | 8.51058 | 9.80674 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.50671 | 4.60349 | 5.24877 | 4.92251 |
INF1 | Young developing inflorescences (5mm) | 9.76255 | 12.8798 | 14.651 | 11.2879 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.4571 | 18.0966 | 18.8221 | 20.9136 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.75406 | 7.95365 | 7.50109 | 9.97985 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.1315 | 10.9456 | 9.76636 | 32.7585 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.18514 | 5.73447 | 6.02315 | 6.48998 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.72939 | 4.65279 | 5.27236 | 12.0423 |
CDS Structure of MLOC_21799
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_21799.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g44900.2 |
-1 |
3e-23 |
104 |
59/105 (56%) |
13103.m04842 protein CCR4-NOT transcription factor, putative, expressed |
TAIR PP10 |
AT5G18230.1 |
-1 |
2e-23 |
104 |
59/105 (56%) |
transcription regulator NOT2/NOT3/NOT5 family protein | chr5:6021610-6027031 REVERSE LENGTH=843 |